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 FITC and Fluorescein Dyes and Labeling Kits 

Cellular imaging of tubulin with fluorescein-conjugated antibody

Amine-reactive and sulfhydryl-reactive derivatives of fluorescein dye, including antibody labeling kits.

Thermo Scientific Fluorescein Labeling Reagents and Kits are high-performance derivatives of fluorescein dye, activated for easy and reliable labeling of antibodies, proteins and other molecules for use as fluorescent probes.

Fluorescein isothiocyanate (FITC) and NHS-Fluorescein are amine-reactive derivatives of fluorescein dye that have wide-ranging application as antibody and other probe labels for use in fluorescence microscopy, flow cytometry and immunofluorescence-based assays such as Western blotting and ELISA. Fluorescein-5-maleimide and 5-IAF are sulfhydryl-reactive derivatives of fluorescein dye. Choose from stand-alone packages of these labeling reagents or select a convenient FITC or NHS-Fluorescein Antibody Labeling Kit.

Highlights of Fluorescein and FITC Labeling Kits:

  • Fast – label and purify antibody in about one hour
  • Amine-specific labeling – the NHS-ester or isothiocyanate efficiently labels antibodies and other purified proteins at primary amines (lysine side chains)
  • Optimized procedure – following the standard protocol results in antibodies with excellent dye:protein ratios for optimum activity and fluorescence
  • Single-use fluors – no need to weigh tiny amounts powder; kits contain single-use vials of reagent
  • Efficient purification – kits include purification resin and easy-to-use spin columns, ensuring rapid and efficient removal of non-reacted dye and excellent protein recovery

Applications for Fluorescein Labeling Reagents:

  • Label antibodies for use as immunofluorescent probes
  • Label oligonucleotides for hybridization probes
  • Detect proteins in gels and on Western blots

Properties of Amine-reactive Fluorescein Dyes:

FITC is the base fluorescein molecule functionalized with an isothiocyanate reactive group (–N=C=S) at one of two hydrogen atoms on the bottom ring of the structure. This derivative is reactive towards primary amine groups on proteins, peptides and other biomolecules. NHS-fluorescein is activated with the N-hydroxy-succinimidyl-ester (NHS ester) functional group. Compared to FITC, the NHS-ester deriviative has greater specificity toward primary amines in the presence of other nucleophiles and results in a more stable linkage following labeling. Pierce Amine-reactive Fluorescein Dyes are mixtures of isomers with reactive groups attached at the 5- and 6-positions of the bottom ring. The properties of these isomers are indistinguishable in terms of excitation and emission spectra, and for protein applications there is no need to isolate a specific isomer.

 

NHS-Fluorescein

FITC

Structure

Chemical structure of NHS-Fluorescein

Chemical structure of fluorescein isothiocyanate, FITC

Alternative names

5/6-FAM SE

5/6-FITC

Chemical name

5/6-carboxyfluorescein succinimidyl ester

5(6)-fluorescein isothiocyanate mixed isomer

Molecular weight

473.4

389.2

Excitation source

488nm spectral line, argon-ion laser

488nm spectral line, argon-ion laser

Excitation wavelength

494nm

494nm

Emission wavelength

518nm

518nm

Extinction coefficient

> 70,000/M cm

> 70,000/M cm

CAS #

117548-22-8

27072-45-3

Purity

> 90% by HPLC

> 95% by HPLC

Solubility

Soluble in DMF or DMSO

Soluble in aqueous buffers at pH > 6

Storage

Desiccated at -20°C, protect from moisture, use only fresh solutions

Desiccated at -20°C, protect from moisture, use only fresh solutions

Reactive groups

NHS ester, reacts with primary amines at pH 7.0 to 9.0

Isothiocyanate, reacts with primary amines at pH 7.0 to 9.0

 

Properties of Sulfhydryl-reactive Fluorescein Dyes:

Fluorescein-5-maleimide and 5-IAF are sulfhydryl-reactive derivatives of fluorescein dye. Fluorescein-5-maleimide is the base fluorescein molecule functionalized with a maleimide reactive group by replacing a hydrogen atom on the bottom ring of the structure. 5-IAF is the core fluorescein molecule functionalized with an iodoacetamide group. Both fluorescein derivatives are reactive toward sulfhydryl groups (e.g., reduced cysteine residues) on proteins, peptides and other biomolecules.

 

Fluorescein-5-maleimide

5-Iodoacetamido-fluorescein

Structure

Fluorescein-5-Maleimide

5-IAF

Alternative names

5-MF, 5-maleimido-fluorescein

5-IAF, 5-iodoacetamidofluorescein

Chemical name

1H-Pyrrole-2,5-dione, 1-(3',6'-dihydroxy-3-oxospiro(isobenzofuran-1(3H),9'-(9H)xanthen-5-yl)-

Acetamide, N-(3',6'-dihydroxy-3-oxospiro(isobenzofuran-1(3H), 9'-(9H)xanthen)-5-yl)-2-iodo

Molecular weight

427.36 ±3

515.26 ±3

Excitation source

488nm spectral line, argon-ion laser

488nm spectral line, argon-ion laser

Excitation wavelength

494nm

494nm

Emission wavelength

518nm

518nm

Extinction coefficient

~ 68,000/M cm

> 80,000/M cm

CAS #

75350-46-8

63368-54-7

Solubility

Soluble in DMF or DMSO

Soluble in DMF; aqueous buffers at pH > 6

Storage

Desiccated at -20°C, protect from moisture, use only fresh solutions

Desiccated at -20°C, protect from moisture, use only fresh solutions

Reactive groups

Maleimide, reacts with sulfhydryls at pH 6.5 to 7.5

Iodoacetamide, reacts with sulfhydryls at pH 7.0 to 7.5

 

Application Data:


Detection of alpha-tubulin in A549 cells using secondary antibody labeled with Thermo Scientific Pierce NHS-Fluorescein.
A. Fluorescein

A549 cells stained with Hoechst dye.
B. Hoechst

Merged image of nucleus and alpha-tubulin staining in A549 cells using secondary antibody labeled with Thermo Scientific Pierce NHS-Fluorescein.
C. Merged

Detection of a-tubulin in A549 cells demonstrates use of fluorescein-labeled secondary antibody. Cells were grown in 96-well microplates for 18-20 hrs, fixed with 4% paraformaldehyde (Product #28906) and permeabilized with 0.1% Surfact-Amps X-100 (Product #28314). Cells were then probed with a mouse anti-a-tubulin primary antibody (0.4µg/ml) and Fluorescein-goat anti-mouse secondary antibody (2µg/ml). Nuclei were labeled with Hoechst Dye. Images were acquired by fluorescence microscopy. A. Fluorescence image shows a delicate network of a-tubulin (pseudo-colored green) located exclusively in the cytoplasm. B. Nuclear counterstain with Hoechst Dye (pseudo-colored blue) C. Merged image.

General References:

  1. Miki, M. and dos Remedios, C.G. (1988). Fluorescence quenching studies of fluorescein attached to lys-61 or cys-374 in actin: effects of polymerization, myosin sub fragment-1 binding, and tropomyosin-troponin binding. J. Biochem. 104, 232-235.
  2. Smith, L.M., et al. (1987). The synthesis and use of fluorescent oligonucleotides in DNA sequence analysis. Meth. Enzymol. 155, 260-301.
  3. Vera, J.C., et al. (1988). Purification, amino terminal analysis and peptide mapping of proteins after in situ postelectrophoretic fluorescent labeling. Anal. Biochem. 174, 38-45.
  4. Szewczyk, B. and Summers, D.F. (1987). Fluorescent staining of proteins transferred to nitrocellulose allowing for subsequent probing with antisera. Anal. Biochem. 164, 303-306.
  5. Der-Balian, G.P., et al. (1988). Fluorescein labeling of Fab while preserving single thiol. Anal. Biochem. 173, 59-63.
  6. Vigers, G.P.A., et al. (1988). Fluorescent microtubules break up under illumination. J. Cell Biol. 107, 1011.
  7. Goding, J.W. (1976). Conjugation of antibodies with fluorochrome: modifications to the standard methods. J. Immunol. Meth. 13, 215-226.
  8. Szewczyk, B., et al. (1987). Use of different fluorochromes for monitoring protein elution and transfer. Electrophoresis 8, 25-28.
  9. Smith, L.M., et al. (1986). Fluorescence detection in automated DNA sequence analysis. Nature 321, 674-678.
  10. Staines, W.A., et al. (1988). Three-color immunofluorescence histochemistry allowing triple labeling within a single section. J. Histochem. Cytochem. 36(2), 145-151.

Related Products and Resources:

DyLight 488 is a newer derivative of fluorescein, tailored for various chemical and biological applications where greater photostability and fluorescence intensity, pH independence, and a narrower emission spectrum are required.

DyLight 488 Antibody Labeling Kits
DyLight 488 and other DyLight Reactive Fluors
Tech Tip #31 – Calculate dye:protein (F/P) molar ratios
Fluorescent Labeling – Top-level menu of all fluorescent reagents

*Trademark, see link in page footer.



Ordering Information
Bulk quantities: InquireBulk quantities: Inquire    Certificate of AnalysisCertificate of Analysis   Product InstructionsProduct Instructions   MSDSMSDS
Product # Description Pkg. Size Files Price
46409 NHS-Fluorescein 1g MSDS for product # 46409 NHS-Fluorescein Product Instructions $412.00

46410 NHS-Fluorescein 100mg MSDS for product # 46410 NHS-Fluorescein Product Instructions $64.00

46424 FITC 1g MSDS for product # 46424 FITC Product Instructions $155.00

46425 FITC 100mg MSDS for product # 46425 FITC Product Instructions $52.00

53027 FITC Antibody Labeling Kit
Sufficient For: Labeling and purifying 3 x 1mg (2mg/mL) of IgG or similar amounts of other proteins.
Kit Contents:
FITC, 3 vials
Borate Buffer, 1mL
Purification Resin, 5mL
Spin Columns, 6 each
Collection Tubes, 12 each
3-rxn kit MSDS for product # 53027 FITC Antibody Labeling Kit Product Instructions $247.00

53029 NHS-Fluorescein Antibody Labeling Kit
Sufficient For: Labeling and purifying 3 x 1mg (2mg/mL) of IgG or similar amounts of other proteins.
Kit Contents:
NHS-Fluorescein, 3 vials
Borate Buffer, 1mL
Purification Resin, 5mL
Spin Columns, 6 each
Collection Tubes, 12 each
3-rxn kit MSDS for product # 53029 NHS-Fluorescein Antibody Labeling Kit Product Instructions $247.00

62245 Fluorescein-5-Maleimide 25mg MSDS for product # 62245 Fluorescein-5-Maleimide Product Instructions $150.00

62246 5-Iodoacetamido-fluorescein (5-IAF) 25mg MSDS for product # 62246 5-Iodoacetamido-fluorescein (5-IAF) Product Instructions $150.00

46130 Fluorescein-5-Maleimide
Replaced by Part No. 62245. Available until stock is depleted.
25mg Product Instructions MSDS for product # 46130 Fluorescein-5-Maleimide $240.00

46120 5-Iodoacetamido-fluorescein (5-IAF)
Replaced by Part No. 62246. Available until stock is depleted.
25mg Product Instructions MSDS for product # 46120 5-Iodoacetamido-fluorescein (5-IAF) $275.00


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